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Update index docs to remove references to 'indexing only mode' #3376

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Update index docs to remove references to 'indexing only mode'

Update index docs to remove references to 'indexing only mode' #3376

Run tests (tests/remove_ribo_rna.nf.test docker NF-24.04.2)

Run tests (tests/remove_ribo_rna.nf.test docker NF-24.04.2)
succeeded May 27, 2025 in 18m 10s