Releases: zhengzhenxian/Repun
Releases · zhengzhenxian/Repun
v0.1.1
v0.1.0
- Added somatic variant representation unification workflow. User can enable by using the --somatic_mode option. The somatic mode prioritizes only low-VAF sites (default 0.08, configurable using --max_af_for_somatic_unification) during processing and optimized alignment scanning for computational efficiency. A configurable edit distance thresholds (maximum 0 for SNV and 4 for Indel) is used. This allows for gaps between VCF haplotypes and alignment haplotypes for more potential matches into manual consideration.
v0.0.1
Initial release.