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Releases: zhengzhenxian/Repun

v0.1.1

07 May 15:27
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  1. Fixed duplicated DP and AF in somatic mode.
  2. Added DP and AF in germline output VCF.

v0.1.0

23 Apr 12:33
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  1. Added somatic variant representation unification workflow. User can enable by using the --somatic_mode option. The somatic mode prioritizes only low-VAF sites (default 0.08, configurable using --max_af_for_somatic_unification) during processing and optimized alignment scanning for computational efficiency. A configurable edit distance thresholds (maximum 0 for SNV and 4 for Indel) is used. This allows for gaps between VCF haplotypes and alignment haplotypes for more potential matches into manual consideration.

v0.0.1

18 Sep 06:39
d2f28c7
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Initial release.