TRIMER is a package for building integrated metabolic–regulatory models base on Bayesian network. TRIMER can be used for knockout phenotype prediction and knock flux prediction.
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Updated
Apr 29, 2025 - MATLAB
TRIMER is a package for building integrated metabolic–regulatory models base on Bayesian network. TRIMER can be used for knockout phenotype prediction and knock flux prediction.
Python second-order approximation to the PromoterHunter code
Code and data for the analysis of TF-binding sites positional entropy in phage genomes, used in Mascolo et al. (2022)
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