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    14 repositories

    • enzymeml-rs

      Public
      🧬 - Data management and modeling framework based on EnzymeML.
      Rust
      •
      MIT License
      •0•0•0•0•Updated May 29, 2025May 29, 2025

    • libsbml-rs

      Public
      ⚙️ - A Rust library to handle SBML documents
      Rust
      •
      GNU Lesser General Public License v3.0
      •0•1•2•0•Updated May 29, 2025May 29, 2025

    • PyEnzyme

      Public
      🧬 - Data management and modeling framework based on EnzymeML.
      Python
      •
      BSD 2-Clause "Simplified" License
      •9•24•4•2•Updated May 25, 2025May 25, 2025

    • enzymeml-specifications

      Public
      📖 - Formal definition of EnzymeML in various schema languages as well as APIs in various programming languages
      dataschemafairkinetic-modelingbiocatalysisenzymeml
      Go
      •1•2•0•0•Updated May 12, 2025May 12, 2025

    • .github

      Public
      MIT License
      •0•0•0•0•Updated Mar 13, 2025Mar 13, 2025

    • EnzymeML-Schema

      Public archive
      0•2•1•0•Updated Mar 6, 2025Mar 6, 2025

    • trainingcourse_website

      Public
      Website of the EnzymeML Training Course
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Feb 10, 2025Feb 10, 2025

    • strenda-specifications

      Public
      Jupyter Notebook
      •1•0•1•1•Updated Sep 25, 2024Sep 25, 2024

    • enzymeml-suite

      Public
      TypeScript
      •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • slac_modeling

      Public
      📕 - Kinetic modeling workflow
      modelingenzyme-kineticsbiocatalysis
      Jupyter Notebook
      •0•0•0•0•Updated Jan 8, 2024Jan 8, 2024

    • enzymeml.github.io

      Public
      EnzymeML GitHub pages
      HTML
      •1•0•1•0•Updated Sep 29, 2023Sep 29, 2023

    • Lauterbach_2022

      Public
      📦 - Supporting information and notebooks to "EnzymeML: seamless data flow and modeling of enzymatic data"
      notebookjupyter-notebook
      Jupyter Notebook
      •3•1•0•0•Updated Apr 11, 2022Apr 11, 2022

    • Dienhart_2022

      Public
      This repository contains the written report of the master thesis 'FAIR modelling of enzyme kinetics by EnzymeML and Jupyter Notebooks' as a Jupyter Book
      Jupyter Notebook
      •
      BSD 2-Clause "Simplified" License
      •0•0•0•0•Updated Jan 26, 2022Jan 26, 2022

    • workflow-jupyter-notebooks

      Public
      This repository extends the EnzymeML project by providing Jupyter notebooks for data management of EnzymeML documents. Such as workflows for visualization, kinetic modeling and enriching EnzymeML documents.
      Jupyter Notebook
      •
      BSD 2-Clause "Simplified" License
      •0•2•0•0•Updated Jul 22, 2021Jul 22, 2021