Bioinformatics group of AU-ENVS

All

13 repositories

phyloENVS
Public
Tailored Tools for Phyloseq-based Community Analysis.
R
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Other
•0•0•0•0•Updated May 28, 2025May 28, 2025
huginn-emu-smk
Public
Python
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MIT License
•0•0•0•0•Updated Apr 25, 2024Apr 25, 2024
emu-smk
Public
Snakemake pipeline for running EMU
Python
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MIT License
•0•1•0•0•Updated Apr 23, 2024Apr 23, 2024
microbial-networks
Public
Dockerfile
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MIT License
•0•0•0•0•Updated Mar 27, 2024Mar 27, 2024
TotalRNA-Snakemake
Public
A pipeline for TotalRNA analysis
metatranscriptomics snakemake-workflow metatranscriptomic-pipeline
Jupyter Notebook
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MIT License
•2•2•0•0•Updated Mar 25, 2024Mar 25, 2024
jupyter_annotation
Public
Annotation of contigs from TotalRNA
Jupyter Notebook
•
MIT License
•0•0•0•0•Updated Feb 28, 2024Feb 28, 2024
huginn-TotalRNA-Snakemake
Public
TotalRNA pipeline for huginn
Python
•0•0•0•0•Updated Feb 7, 2024Feb 7, 2024
cmg-biotools
Public
C
•0•1•0•0•Updated Oct 11, 2023Oct 11, 2023
GR21_genome_mining
Public
R scripts related to genome mining of Greenland Ice Sheet genomes study
R
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MIT License
•1•0•0•0•Updated Aug 28, 2023Aug 28, 2023
RauENVS
Public
R
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Other
•0•2•0•0•Updated Aug 8, 2023Aug 8, 2023
IlluminaSnakemake
Public
A pipeline for processing raw Illumina reads to draft assemblies and annotations.
Python
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MIT License
•0•1•1•0•Updated May 11, 2023May 11, 2023
GR21_Greenland_Ice_Sheet_Microbial_Diversity_Data_Handling
Public
R
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MIT License
•1•0•0•0•Updated Apr 24, 2023Apr 24, 2023
.github
Public
Bioinformatics section of the Department of Environmental Science of Aarhus University
0•0•0•0•Updated Feb 17, 2023Feb 17, 2023