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6 Virtual Machines and Docker
Nuno Fonseca edited this page Dec 3, 2018
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Docker files with iRAP for different Linux distributions (Ubuntu, Fedora, AWS) are available here. Docker images of iRAP are available in DockerHub.
A wrapper script (irap_docker) to run iRAP in a docker container is available in the scripts folder. The usage is the same as irap (or irap_sc) with the difference that a docker image id needs to be provided.
IRAP_DOCKER_IMAGE=<image id> irap_docker [irap params]
Information about iRAP's docker wrapper for PanCancer project is available here.