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Fix <code>hcs_position_labels</code> docs formatting

documentationImprovements or additions to documentationImprovements or additions to documentation

μManagerMicro-Manager files and metadataMicro-Manager files and metadata

Status: Open.

#307 In czbiohub-sf/iohub;

· ziw-liu opened on May 28, 2025

capture the time interval between frames and units (min, second) in ome-zarr metadata

enhancementNew feature or requestNew feature or request

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#304 In czbiohub-sf/iohub;

· mattersoflight opened on May 27, 2025

Fix copying sub-stores

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

upstreamIssues with upstream dependenciesIssues with upstream dependencies

Status: Open.

#300 In czbiohub-sf/iohub;

· ziw-liu opened on May 19, 2025

 ·  

0.3.0

Reimplement OME-TIFF reading

maintenanceMaintenance workMaintenance work

upstreamIssues with upstream dependenciesIssues with upstream dependencies

μManagerMicro-Manager files and metadataMicro-Manager files and metadata

Status: Open.

#292 In czbiohub-sf/iohub;

· ziw-liu opened on Apr 3, 2025

 ·  

0.3.0

Use zarr-python 3

maintenanceMaintenance workMaintenance work

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#273 In czbiohub-sf/iohub;

· aliddell opened on Feb 25, 2025

 ·  

0.3.0

OME-NGFF v0.5 (with Zarr v3) implementation plan

enhancementNew feature or requestNew feature or request

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#271 In czbiohub-sf/iohub;

· ziw-liu opened on Feb 18, 2025

 ·  

0.3.0

Choose a faster default compressor

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

performanceSpeed and memory usage of the codeSpeed and memory usage of the code

Status: Open.

#266 In czbiohub-sf/iohub;

· ziw-liu opened on Jan 21, 2025

 ·  

0.3.0

Nice to have: <code>__repr__</code> functions for ngff nodes

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#265 In czbiohub-sf/iohub;

· ieivanov opened on Dec 11, 2024

 ·  

0.3.0

contribute to <code>ome-zarr-models-py</code>?

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

upstreamIssues with upstream dependenciesIssues with upstream dependencies

Status: Open.

#260 In czbiohub-sf/iohub;

· d-v-b opened on Nov 22, 2024

Implement OME-NGFF v0.5 (Zarr v3)

enhancementNew feature or requestNew feature or request

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#257 In czbiohub-sf/iohub;

· ziw-liu opened on Oct 16, 2024

 ·  

0.3.0

<code>Position</code> should be a subclass of <code>BaseFOV</code>

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#249 In czbiohub-sf/iohub;

· talonchandler opened on Sep 26, 2024

 ·  

0.3.0

get the zarr dataset size with iohub info verbose

enhancementNew feature or requestNew feature or request

upstreamIssues with upstream dependenciesIssues with upstream dependencies

Status: Open.

#247 In czbiohub-sf/iohub;

· edyoshikun opened on Sep 26, 2024

 ·  

0.3.0