Update CytoTable Environment File #56
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d33bs
approved these changes
May 16, 2023
| @@ -61,7 +61,6 @@ def __base_exec( | |||
| unlock=unlock, | |||
| forceall=force, | |||
| use_conda=True, | |||
| conda_prefix=env_manager, | |||
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Would it make sense to open this parameter up to a CytoSnake user (if it isn't already)? Here I'm wondering whether one might want to distinguish between Snakemake defaults for the conda_prefix (mostly in external compute environments).
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The configurational.yaml contains parameters on how to execute workflows. However, there's no set structure yet. That's a good point. I'll make this as a separate PR.
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I have applied all comments and suggestions! Merging. |
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About
This is a small PR that updates
CytoSnake'sCytoTablemodule.What was changed
cytotable.yamlfile