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## Usage
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We use three workflows to batch process image pairs for glacier surface velocity. For demonstration purposes the workflows are only set up to work over the [Yazghil Glacier](https://earth.google.com/earth/d/1myewNJrDEM0tW1_xdpWCYaRCGDcOBwiy?usp=drive_link) in Pakistan. To run the workflows, simply fork this repository, visit the "Actions" tab, and choose the `batch_image_correlation` workflow (which runs the other two workflows as well).
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![plot](https://github.com/uwescience/SciPy2024-GitHubActionsTutorial/blob/main/glacier_image_correlation/images/workflow_diagram.png)
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![plot](../glacier_image_correlation/images/workflow_diagram.png)
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### 1. `image_correlation_pair`
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This workflow calls a Python script (image_correlation.py) that runs autoRIFT on a pair of spatially overlapping [Sentinel-2 L2A](https://docs.sentinel-hub.com/api/latest/data/sentinel-2-l2a/) images. It requires the [product names](https://sentiwiki.copernicus.eu/web/s2-products) of the two images. The images are downloaded from aws using the [Element 84 Earth Search API](https://element84.com/earth-search/). Only the near infrared band (NIR, B08) is used which has a spatial resolution of 10 m. autoRIFT is used to perform image correlation. Search distances are scaled with temporal baseline assuming a maximum surface velocity of 1000 m/yr, so images acquired farther apart in time take longer to process. Surface velocity maps are saved as geotifs and uploaded as [Github Artifacts](https://docs.github.com/en/actions/using-workflows/storing-workflow-data-as-artifacts).
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![plot](https://github.com/uwescience/SciPy2024-GitHubActionsTutorial/blob/main/glacier_image_correlation/images/input_images.png)
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![plot](../glacier_image_correlation/images/input_images.png)
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### 2. `batch_image_correlation`
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This workflow can be used to create surface velocity maps from many pairs of Sentinel-2 images. Required inputs include maximum cloud cover percent, start month (recommend >=5 to minimize snow cover), end month (recommend <=10 to minimize snow cover), and number of pairs per image, e.g.:
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### 3. `summary_statistics`
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This workflow downloads all of the velocity maps created during a `batch_image_correlation` run and uses them to calculate and plot median velocity, standard deviation of velocity, and valid pixel count across all velocity maps. The summary statistics plot is uploaded as a Github Artifact.
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![plot](https://github.com/uwescience/SciPy2024-GitHubActionsTutorial/blob/main/glacier_image_correlation/images/velocity_summary_statistics.png)
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![plot](../glacier_image_correlation/images/velocity_summary_statistics.png)
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## Acknowledgements

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