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XEC.18.1 subbranch with S:V1264L(Malaysia 15, 8 states) and further S:K478E, Orf1a:E1801D, Orf3a:Q38R(MY 14, 7 states) #2690

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@Walde1nsamkeit

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@Walde1nsamkeit

As XEC.18.1 is mainly found in Malaysia/Singapore and XEC.18 doesn't circulate there, I suggest redesignate XEC.18.1 as XEC.31.1.

XEC.18.1> G25352T(S:V1264L), G29779T> G5668T(Orf1a:E1801D), A22994G(S:K478E), A25505G(Orf3a:Q38R)
Query: C4010T, G25352T, G28378T

Earliest sequence: 02-11 Sembilan, Malaysia EPI_ISL_19878797
Latest sequence: 05-28 Sembilan, Malaysia EPI_ISL_20015905
Regions detected: Malaysia 10(Kelantan 5, Sembilan 2, Melaka 1, Penang 1, Selangor 1)

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/hgPhyloPlace/subtreeAuspice1_genome_test_24a5e4_587670.json?c=country&label=id:node_7369074
Image

Sequences:
EPI_ISL_19878797, EPI_ISL_19894241, EPI_ISL_19906243,
EPI_ISL_19910002, EPI_ISL_19956231, EPI_ISL_19956235-19956237,
EPI_ISL_19956241, EPI_ISL_20015905

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