Merge pull request #2487 from JohnHenryEden/gh-pages

Changes CSS of main content to use all the spaces on the page & update broken links

Author: farid-zare

stable/_sources/funding.rst.txt

@@ -19,10 +19,10 @@ Funding
   <table width="100%" class="noBorder">
        <tr class="noBorder">
        <td class="noBorderImg" width="30%">
-           <div style="align-center;"><a href="http://www.sysmedpd.eu"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/sysmedpd.svg" alt="sysmedpd" width="80"></a></div>
+           <div style="align-center;"><a href="http://www.sysmedpd.eu"><img src="_static/img/sysmedpd.svg" alt="sysmedpd" width="80"></a></div>
        </td>
        <td class="noBorderImg" width="30%">
-            <div style="align-center;"><a href="http://www.sysmedpd.eu"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/eu.svg" alt="eu" width="80"></a></div>
+            <div style="align-center;"><a href="http://www.sysmedpd.eu"><img src="_static/img/eu.svg" alt="eu" width="80"></a></div>
        </td>
        <td class="noBorder" width="40%">
        European Union’s Horizon 2020 research and innovation programme under grant agreement No 668738.
@@ -33,10 +33,10 @@ Funding
     <table width="100%" class="noBorder">
        <tr class="noBorder">
        <td class="noBorderImg" width="30%">
-           <div style="align-center;"><a href="http://www.ncer-pd.lu/index.php/en/"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/ncer.png" alt="ncer" width="80%"></a></div>
+           <div style="align-center;"><a href="http://www.ncer-pd.lu/index.php/en/"><img src="_static/img/ncer.png" alt="ncer" width="80%"></a></div>
        </td>
        <td class="noBorderImg" width="30%">
-            <div style="align-center;"><a href="http://www.ncer-pd.lu/index.php/en/"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/fnr.png" alt="fnr" width="80%"></a></div>
+            <div style="align-center;"><a href="http://www.ncer-pd.lu/index.php/en/"><img src="_static/img/fnr.png" alt="fnr" width="80%"></a></div>
        </td>
        <td class="noBorder" width="40%">
        National Centre of Excellence in Research (NCER) on Parkinson’s disease.
@@ -47,7 +47,7 @@ Funding
     <table width="100%" class="noBorder">
         <tr class="noBorder">
         <td class="noBorderImg" width="60%">
-            <div style="align-center;"><a href="https://energy.gov"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/doe.png" alt="doe" width="80"></a></div>
+            <div style="align-center;"><a href="https://energy.gov"><img src="_static/img/doe.png" alt="doe" width="80"></a></div>
         </td>
         <td class="noBorder" width="40%">
         U.S. Department of Energy, Offices of Advanced Scientific Computing Research and the Biological and Environmental Research as part of the Scientific Discovery Through Advanced Computing program, grant no. DE-SC0010429
@@ -67,10 +67,10 @@ Funding
     <br><br>
     <ul class="featureslogo">
        <li>
-           <div style="align-center;"><a href="http://wwwen.uni.lu/lcsb/"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/largelcsb.png" alt="lcsb" width="100%"></a></div>
+           <div style="align-center;"><a href="http://wwwen.uni.lu/lcsb/"><img src="_static/img/largelcsb.png" alt="lcsb" width="100%"></a></div>
        </li>
        <li>
-           <div style="align-center;"><a href="http://www.uni.lu"><img src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/largeul.png" alt="ul" width="100%"></a></div>
+           <div style="align-center;"><a href="http://www.uni.lu"><img src="_static/img/largeul.png" alt="ul" width="100%"></a></div>
        </li>
     </ul>
    </p>

stable/_static/css/cobra.css

@@ -5543,7 +5543,7 @@ div[class^='highlight'] pre {
 .wy-nav-content {
     padding: 1.618em 3.236em;
     height: 100%;
-    max-width: 800px;
+    max-width: 100vw;
     margin: auto
 }
 

stable/contributing.html

@@ -934,16 +934,16 @@ <h3>Git commit messages<a class="headerlink" href="#git-commit-messages" title="
 description</li>
 <li>Consider starting the commit message (not the title of the PR) with
 an applicable emoji:<ul>
-<li><img alt="bug" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/bug.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:bug:</span></code> when fixing a bug</li>
-<li><img alt="art" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/art.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:art:</span></code> when improving the format/structure of the code</li>
-<li><img alt="racehorse" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/racehorse.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:racehorse:</span></code> when improving performance</li>
-<li><img alt="memo" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/memo.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:memo:</span></code> when writing docs</li>
-<li><img alt="fire" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/fire.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:fire:</span></code> when removing code or files</li>
-<li><img alt="white_check_mark" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/white_check_mark.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:white_check_mark:</span></code> when adding tests</li>
-<li><img alt="penguin" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/penguin.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:penguin:</span></code> when fixing something on Linux</li>
-<li><img alt="apple" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/apple.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:apple:</span></code> when fixing something on macOS</li>
-<li><img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:computer:</span></code> when fixing something on Windows</li>
-<li><img alt="green_heart" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/green_heart.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:green_heart:</span></code> when fixing the CI build</li>
+<li><img alt="bug" height="20px" src="_static/img/bug.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:bug:</span></code> when fixing a bug</li>
+<li><img alt="art" height="20px" src="_static/img/art.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:art:</span></code> when improving the format/structure of the code</li>
+<li><img alt="racehorse" height="20px" src="_static/img/racehorse.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:racehorse:</span></code> when improving performance</li>
+<li><img alt="memo" height="20px" src="_static/img/memo.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:memo:</span></code> when writing docs</li>
+<li><img alt="fire" height="20px" src="_static/img/fire.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:fire:</span></code> when removing code or files</li>
+<li><img alt="white_check_mark" height="20px" src="_static/img/white_check_mark.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:white_check_mark:</span></code> when adding tests</li>
+<li><img alt="penguin" height="20px" src="_static/img/penguin.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:penguin:</span></code> when fixing something on Linux</li>
+<li><img alt="apple" height="20px" src="_static/img/apple.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:apple:</span></code> when fixing something on macOS</li>
+<li><img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:computer:</span></code> when fixing something on Windows</li>
+<li><img alt="green_heart" height="20px" src="_static/img/green_heart.png" width="20px"/> <code class="docutils literal notranslate"><span class="pre">:green_heart:</span></code> when fixing the CI build</li>
 </ul>
 </li>
 </ul>
@@ -954,13 +954,13 @@ <h2>Issues/enhancements guide<a class="headerlink" href="#issues-enhancements-gu
 <div class="section" id="what-should-i-do-before-opening-an-issue">
 <h3>What should I do before opening an issue?<a class="headerlink" href="#what-should-i-do-before-opening-an-issue" title="Permalink to this headline">¶</a></h3>
 <p>Following these guidelines helps maintainers and the community
-understand your report <img alt="pencil" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/pencil.png" width="20px"/>, reproduce the behavior <img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/>, and
+understand your report <img alt="pencil" height="20px" src="_static/img/pencil.png" width="20px"/>, reproduce the behavior <img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/>, and
 fix it.</p>
 <ul class="simple">
 <li><strong>Get the latest version</strong> Check if you can reproduce the problem
 with the latest version, if the problem happens when you run your
 script/function with a different version of <code class="docutils literal notranslate"><span class="pre">MATLAB</span></code> or when using
-a different computer <img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/> or different operating system (such
+a different computer <img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/> or different operating system (such
 as <code class="docutils literal notranslate"><span class="pre">Linux</span></code>, <code class="docutils literal notranslate"><span class="pre">Windows</span></code>, or <code class="docutils literal notranslate"><span class="pre">macOS</span></code>).</li>
 <li><strong>Check The COBRA Toolbox Forum on Google</strong>
 <a class="reference external" href="https://groups.google.com/forum/#!forum/cobra-toolbox">here</a>
@@ -997,7 +997,7 @@ <h3>How can I report an issue (or enhancement)?<a class="headerlink" href="#how-
 <li>If you’re reporting that <code class="docutils literal notranslate"><span class="pre">MATLAB</span></code> crashed, include a crash report.
 Indicate the line that you think that made <code class="docutils literal notranslate"><span class="pre">MATLAB</span></code> crash. As this
 is an operating system related issue, please make sure to test the
-same code on a different computer and/or operating system <img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/>
+same code on a different computer and/or operating system <img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/>
 before reporting the issue.</li>
 <li>If the problem is related to performance, include more details, such
 as CPU information, RAM, computer brand/model. Eventually, mention

stable/funding.html

@@ -162,7 +162,7 @@ <h1>Funding<a class="headerlink" href="#funding" title="Permalink to this headli
 <div style="align-center;"><a href="http://www.sysmedpd.eu"><img alt="sysmedpd" height="128" src="./_static/img/sysmedpd.png"/></a></div>
 </td>
 <td class="noBorderImg" width="30%">
-<div style="align-center;"><a href="http://www.sysmedpd.eu"><img alt="eu" height="128" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/eu.svg"/></a></div>
+<div style="align-center;"><a href="http://www.sysmedpd.eu"><img alt="eu" height="128" src="_static/img/eu.svg"/></a></div>
 </td>
 <td class="noBorder" width="40%">
      European Union’s Horizon 2020 research and innovation programme under grant agreement No 668738.

stable/genindex.html

@@ -44,7 +44,7 @@
 <div class="wy-side-scroll">
 <div class="wy-side-nav-search">
 <a href="index.html">
-<img alt="cobratoolbox logo" class="logo" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/cobratoolbox_logo_transparent.png"/>
+<img alt="cobratoolbox logo" class="logo" src="_static/img/cobratoolbox_logo_transparent.png"/>
 </a>
 <h1>The COBRA Toolbox</h1>
 <div role="search">

stable/guides/documentationGuide.html

@@ -44,7 +44,7 @@
 <div class="wy-side-scroll">
 <div class="wy-side-nav-search">
 <a href="../index.html">
-<img alt="logo" class="logo" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/logo.png"/>
+<img alt="logo" class="logo" src="_static/img/logo.png"/>
 </a>
 <h1>The COBRA Toolbox</h1>
 <div role="search">

stable/guides/issueGuide.html

@@ -44,7 +44,7 @@
 <div class="wy-side-scroll">
 <div class="wy-side-nav-search">
 <a href="../index.html">
-<img alt="logo" class="logo" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/logo.png"/>
+<img alt="logo" class="logo" src="_static/img/logo.png"/>
 </a>
 <h1>The COBRA Toolbox</h1>
 <div role="search">
@@ -134,13 +134,13 @@ <h1>Issues/enhancements guide<a class="headerlink" href="#issues-enhancements-gu
 <div class="section" id="what-should-i-do-before-opening-an-issue">
 <h2>What should I do before opening an issue?<a class="headerlink" href="#what-should-i-do-before-opening-an-issue" title="Permalink to this headline">¶</a></h2>
 <p>Following these guidelines helps maintainers and the community
-understand your report <img alt="pencil" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/pencil.png" width="20px"/>, reproduce the behavior <img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/>, and
+understand your report <img alt="pencil" height="20px" src="_static/img/pencil.png" width="20px"/>, reproduce the behavior <img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/>, and
 fix it.</p>
 <ul class="simple">
 <li><strong>Get the latest version</strong> Check if you can reproduce the problem
 with the latest version, if the problem happens when you run your
 script/function with a different version of <code class="docutils literal"><span class="pre">MATLAB</span></code> or when using
-a different computer <img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/> or different operating system (such
+a different computer <img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/> or different operating system (such
 as <code class="docutils literal"><span class="pre">Linux</span></code>, <code class="docutils literal"><span class="pre">Windows</span></code>, or <code class="docutils literal"><span class="pre">macOS</span></code>).</li>
 <li><strong>Check The COBRA Toolbox Forum on Google</strong>
 <a class="reference external" href="https://groups.google.com/forum/#!forum/cobra-toolbox">here</a>
@@ -177,7 +177,7 @@ <h2>How can I report an issue (or enhancement)?<a class="headerlink" href="#how-
 <li>If you’re reporting that <code class="docutils literal"><span class="pre">MATLAB</span></code> crashed, include a crash report.
 Indicate the line that you think that made <code class="docutils literal"><span class="pre">MATLAB</span></code> crash. As this
 is an operating system related issue, please make sure to test the
-same code on a different computer and/or operating system <img alt="computer" height="20px" src="http://gibbs.unal.edu.co/cobradoc/cobratoolbox/img/computer.png" width="20px"/>
+same code on a different computer and/or operating system <img alt="computer" height="20px" src="_static/img/computer.png" width="20px"/>
 before reporting the issue.</li>
 <li>If the problem is related to performance, include more details, such
 as CPU information, RAM, computer brand/model. Eventually, mention