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cleanup script 4
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scripts/4.plot_smetana_detailed_interactions.md

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@@ -364,7 +364,8 @@ ggplot(smet_gut %>% filter(ave_smet>=0.90,name!="Fe2+",name!="Hydrogen Ion"),
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## 🍉 Discussion questions
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- Do the predictions make sense for your specific community from a biological perspective?
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- Do the predictions make sense for your specific community from a
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biological perspective?
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- How can these predictions be validated experimentally?
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- Look at the receiver species on your community’s alluvial diagram,
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are they known to be auxotrophic for the metabolites we predicted

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