Isolate define_waterregions test to address issue with col2map command

Author: doc78

.github/workflows/ci_env.yml

@@ -47,4 +47,5 @@ jobs:
       shell: bash -el {0}
       run: |
         pip install pytest pytest-cov
-        pytest
+        pytest -m "not defwaterregions"
+        pytest -m "defwaterregions"

pytest.ini

@@ -7,4 +7,5 @@ filterwarnings =
     ignore::DeprecationWarning
     ignore::UserWarning
     ignore::RuntimeWarning
-# addopts = -ra -x -l --cov=lisfloodutilities --cov-config=.coveragerc -vv
+#addopts = -ra -x -l --cov=lisfloodutilities --cov-config=.coveragerc -m "not defwaterregions" -vv
+addopts = -m "not defwaterregions"

tests/test_waterregions.py

@@ -1,5 +1,7 @@
 import os
 
+import pytest
+
 from lisfloodutilities.readers import PCRasterMap
 
 from lisfloodutilities.waterregions.define_waterregions import define_waterregions
@@ -9,6 +11,7 @@
 
 class TestWaterRegions:
 
+    @pytest.mark.defwaterregions
     def test_define_waterregions(self):
         calib_points = 'tests/data/waterregions/calib_points_test.txt'
         countries_id = 'tests/data/waterregions/countries_id_test.map'