From db7e4ada20bd9e5648972648d4a4ce3d671d0b37 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?K=C3=BCbra=20Narc=C4=B1?= Date: Wed, 21 Aug 2024 14:10:14 +0000 Subject: [PATCH] closes issue Nextflow review @bobturneruk ep11, Key points #148 --- episodes/11-Simple_Rna-Seq_pipeline.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/episodes/11-Simple_Rna-Seq_pipeline.md b/episodes/11-Simple_Rna-Seq_pipeline.md index 965d8032..9b3fab1e 100644 --- a/episodes/11-Simple_Rna-Seq_pipeline.md +++ b/episodes/11-Simple_Rna-Seq_pipeline.md @@ -909,7 +909,7 @@ Note: runtime metrics may be incomplete for run short running tasks.. :::::::::::::::::::::::::::::::::::::::: keypoints - Nextflow can combined tasks (processes) and manage data flows using channels into a single pipeline/workflow. -- A Workflow can be parameterise using `params` . These value of the parameters can be captured in a log file using `log.info` +- A Workflow can be parameterise using `params` . These value of the parameters can be captured in a log file using `log.info`. Rehab workflow parameters [here](episodes/02-workflow_parameters.md). - Nextflow can handle a workflow's software requirements using several technologies including the `conda` package and enviroment manager. - Workflow steps are connected via their `inputs` and `outputs` using `Channels`. - Intermediate pipeline results can be transformed using Channel `operators` such as `combine`.