v0.29.1

Turing v0.29.1

Diff since v0.29.0

Merged pull requests:

• Attach varname_to_symbol mapping to Chains (#2078) (@torfjelde)

v0.29.0

Turing v0.29.0

Diff since v0.28.3

Closed issues:

• How to conduct Bayesian inference using an existing posterior samples as new prior distribution, as well as new observations in Turing? (#2069)

Merged pull requests:

• Reorganised some files. (#2055) (@yebai)
• Remove some obsolete utility exports. (#2070) (@yebai)
• Remove usage of DynamicPPL.tonamedtuple (#2071) (@torfjelde)
• FlattenIterator is replaced by varname_and_value_leaves (#2072) (@yebai)
• rename a few folders for clarity (#2073) (@yebai)
• Remove redundant docs link (#2075) (@willtebbutt)
• Tracker imports no longer needed. (#2076) (@yebai)

v0.28.3

Turing v0.28.3

Diff since v0.28.2

Closed issues:

• method overwritten when I add Turing.jl pkg (#2061)
• Can't apply Bijectors.ordered to TDist(), says it's constrained (#2064)
• Incorrect bijector dimensions for models using SimplexBijector (#2065)

Merged pull requests:

• Fix incorrect output dimensions in stacked bijectors (#2066) (@bgroenks96)

v0.28.2

Turing v0.28.2

Diff since v0.28.1

Closed issues:

• Benchmarking Turing against Stan on very simple models (#1283)
• Deadlinks (#1647)
• Turing slows down as the number of generic types increases (#1940)
• Turing checkpointing by callbacks (#1995)
• Allow LogDensityProblems.logdensity to take a named tuple (#2038)
• Saving generated values (#2059)

Merged pull requests:

• New feature: muliple iterations within Gibbs (#1881) (@xukai92)
• CompatHelper: bump compat for Bijectors to 0.13, (keep existing compat) (#2018) (@github-actions[bot])
• MH Constructor (#2037) (@JaimeRZP)
• CompatHelper: bump compat for NamedArrays to 0.10, (keep existing compat) (#2062) (@github-actions[bot])
• CompatHelper: bump compat for NamedArrays to 0.10 for package test, (keep existing compat) (#2063) (@github-actions[bot])

v0.28.1

Turing v0.28.1

Diff since v0.28.0

Merged pull requests:

• Transfer all high-level docs to TuringTutorials (#1933) (@yebai)
• Cleanup test utilities (#2056) (@yebai)
• Bugfix in model evaluation not using SMC samplers (#2057) (@yebai)

v0.28.0

Turing v0.28.0

Diff since v0.27.1

v0.27.1

Turing v0.27.1

Diff since v0.27.0

Closed issues:

• Save samples as we go (#2015)

Merged pull requests:

• bump compat of AdvancedHMC (#2050) (@JaimeRZP)
• Bump bijectors compat (#2052) (@yebai)

v0.27.0

Turing v0.27.0

Diff since v0.26.6

Closed issues:

• Different order of parameters in MCMC chain vs. MAP result (#1322)
• Allow silencing variational inference log messages (#1493)
• Any plans on implementing DREAM (Differential Evolution based particle inference)? (#1640)
• Kernel dies with Gibbs or ADVI with models involving categorical or dirichlet (#1777)
• Feature request: Output maximized ELBO after variational inference (#1896)
• stack overflow in ADVI (#1910)

Merged pull requests:

• Transfer some test utility function into DynamicPPL (#2049) (@yebai)
• Move Optim support to extension (#2051) (@devmotion)

v0.26.6

Turing v0.26.6

Diff since v0.26.5

Merged pull requests:

• Revert dependencies on FillArrays (#2042) (@yebai)
• Fix redundant definition of getstats (#2044) (@devmotion)

v0.26.5

Turing v0.26.5

Diff since v0.26.4

Merged pull requests:

• Update FillArrays compat to 1.4.1 (#2035) (@devmotion)
• Minor fix in CoefTable information (#2036) (@palmtree2013)
• Fix testset for external samplers (#2039) (@yebai)
• Replacement for #2039 (#2040) (@yebai)