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The question about cellphoneDB's visualization #272

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MoodyBlues319 opened this issue Apr 2, 2025 · 0 comments
Open

The question about cellphoneDB's visualization #272

MoodyBlues319 opened this issue Apr 2, 2025 · 0 comments

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@MoodyBlues319
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When I use ov.pl.cpdb_interacting_heatmap(adata=adata,
celltype_key='major_celltype',
means=cpdb_results['means'],
pvalues=cpdb_results['pvalues'],
source_cells=['1','2','3'],
target_cells=['Macrophages','Epithelial cell','CD8+ T cells','Treg','NK','DC'],
plot_secret=True,
min_means=3,
nodecolor_dict=None,
ax=None,
figsize=(8,20),
fontsize=10)
The source part of the cell arrangement is disordered, can not be adjusted, how to solve?

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