pandas version hard to pin-down

[joseagraz]

I'm running omicverse in a docker container and can't pin-down the acceptable pandas version. Does anybody know the exact Pandas version that will meet requirements? See Terminal outputs below and Dockerfile

Terminal outputs:
Version: 1.6.11, Tutorials: https://omicverse.readthedocs.io/
Dependency error: (pandas 1.5.3 (/usr/local/lib/python3.10/site-packages), Requirement.parse('pandas>=2.1'), {'lifelines'})

Version: 1.6.11, Tutorials: https://omicverse.readthedocs.io/
Dependency error: (pandas 2.2.3 (/usr/local/lib/python3.10/site-packages), Requirement.parse('pandas<2.1,>=0.25'), {'scprep'})

Version: 1.6.11, Tutorials: https://omicverse.readthedocs.io/
Dependency error: (pandas 2.0.3 (/usr/local/lib/python3.10/site-packages), Requirement.parse('pandas>=2.1'), {'lifelines'})

Dockerfile:
FROM starlitnightly/omicverse:py310_cu121_latest

----------------------------------------------------------

RUN apt-get update
&& apt-get install -y --no-install-recommends
zlib1g git build-essential
libgl1-mesa-glx libglib2.0-dev
python3-setuptools
&& apt-get clean
&& rm -rf /var/lib/apt/lists/*

----------------------------------------------------------

Setup for VS code debugger

RUN pip install --upgrade pip
&& pip install --no-cache-dir eeisp==0.5.0 debugpy uvicorn

----------------------------------------------------------

RUN pip install --no-cache-dir git+https://github.com/Starlitnightly/omicverse.git \

Installing pytorch for CUDA

&& pip3 install --no-cache-dir  torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cu121 \

----------------------------------------------------------

Installing torch_geometric for CUDA

# && pip install pyg_lib torch_scatter torch_sparse torch_cluster torch_spline_conv -f https://data.pyg.org/whl/torch-2.5.1+cu118.html \
&& pip install torch_geometric  phate>=1.0  opencv-python scikit-image \
&& pip install --upgrade lifelines tqdm numpy==1.23.5 llvmlite==0.41.1 numba==0.58.1

RUN pip install --no-cache-dir 'pandas<2.1,>=0.25'