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ScipionCloud AMI manual

Laura edited this page Oct 27, 2017 · 5 revisions

ScipionCloud AMI manual

Software installed

Scipion

Last version of Scipion is installed at: /usr/local/scipion

Note: Scipion is installed from github repository, current branch is master.

EM packages installed are: Bsoft 1.9.0 Ctffind4 4.1.5 Eman 2.12 Frealing 9.07 Motioncor2 16.10.19 Motioncorr 2.1 Relion 1.4 and 2.0 resmap 1.1.5s2 Spider 21.13 Summovie 1.0.2 (Chimera is not installed because it hangs out the guacamole connection).

To verify installed packages type:

scipion install --help And to install latest version of a package: scipion install package-name

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