ScipionCloud AMI manual

ScipionCloud AMI manual

Software installed

Scipion

Last version of Scipion is installed at: /usr/local/scipion

Note: Scipion is installed from github repository, current branch is master.

EM packages installed are:

• Bsoft 1.9.0
• Ctffind4 4.1.5
• Eman 2.12
• Frealing 9.07
• Motioncor2 16.10.19
• Motioncorr 2.1
• Relion 1.4 and 2.0
• resmap 1.1.5s2
• Spider 21.13
• Summovie 1.0.2

(Chimera is not installed because it hangs out the guacamole connection).

To verify installed packages type:

scipion install --help

And to install latest version of a package:

scipion install package-name