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Scipion is an image processing framework for obtaining 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents a unified interface for both biologists and developers. Scipion allows you to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on.
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See this ~5 minutes Introductory Video that shows an overview of Scipion.
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Follow this step-by-step guide about How to Install Scipion.
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Complete the Mix-and-Match Tutorial illustrating how to use several packages.
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Take a look at the list of current integrated Packages and Protocols (more than 100).
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Everyone is welcome to contribute:
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Open a New Issue to report a bug or suggest a new feature.
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Extend Scipion with new protocols or packages.
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Report us mistakes in the documentation or generate new content (require GitHub account)
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The documentation is divided into two main categories: Users and Developers.