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Facilities tutorial
Pablo Conesa edited this page Jun 15, 2018
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We aim to introduce a few concepts that we think will give any IT/developer a good set of resources to adapt Scipion to you facility setup. Scipion scope is confined to Image processing but in a facilities context, there are other actors in place that Scipion might need to adapt or even communicate. For that, we need to launch Scipion at some point in the facility pipeline or customize part of its outputs, or even send/grab information from a LIMS/ERP system that handles visits/sessions or sample information. We will go through 3 main concepts and learn how to create new element into Scipion:
- Developing a Protocol Things to do here common to the rest: create a package: em/packages/myfacility
- Streamifying a protocol
- Developing a monitor
- The Summary monitor and customization options.