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Advanced Development Topics
tranquilinho edited this page May 3, 2016
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Most of the Scipion graphic user interfaces (GUIs) to visualize EM objects (particles, coordinates, volumes, etc) have been developed in Java, extending Xmipp ShowJ and Particle Picker. Implementation details are available here.
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Conventions: Description of the conventions followed in Scipion.
There are many things you can do with Scipion using just the command line, like running tests, starting the webserver, or opening a ShowJ viewer. Read this page to learn how.
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Check what can be reused from here: http://xmipp.cnb.csic.es/twiki/bin/view/Xmipp/DebuggingProfiling, check with Juan if he has some NOTES about profiling
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Debugging in Python: with PyCharm and WinPdb